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- ///////////////////////////////////////////
- // Running convGAN-full on folding_kr-vs-k-zero-one_vs_draw
- ///////////////////////////////////////////
- Load 'data_input/folding_kr-vs-k-zero-one_vs_draw'
- from pickle file
- Data loaded.
- -> Shuffling data
- ### Start exercise for synthetic point generator
- ====== Step 1/5 =======
- -> Shuffling data
- -> Spliting data to slices
- ------ Step 1/5: Slice 1/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 2152 synthetic samples
- -> test with 'LR'
- LR tn, fp: 550, 10
- LR fn, tp: 2, 19
- LR f1 score: 0.760
- LR cohens kappa score: 0.749
- LR average precision score: 0.855
- -> test with 'GB'
- GB tn, fp: 558, 2
- GB fn, tp: 2, 19
- GB f1 score: 0.905
- GB cohens kappa score: 0.901
- -> test with 'KNN'
- KNN tn, fp: 552, 8
- KNN fn, tp: 2, 19
- KNN f1 score: 0.792
- KNN cohens kappa score: 0.783
- ------ Step 1/5: Slice 2/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 2152 synthetic samples
- -> test with 'LR'
- LR tn, fp: 548, 12
- LR fn, tp: 0, 21
- LR f1 score: 0.778
- LR cohens kappa score: 0.768
- LR average precision score: 0.924
- -> test with 'GB'
- GB tn, fp: 560, 0
- GB fn, tp: 1, 20
- GB f1 score: 0.976
- GB cohens kappa score: 0.975
- -> test with 'KNN'
- KNN tn, fp: 558, 2
- KNN fn, tp: 0, 21
- KNN f1 score: 0.955
- KNN cohens kappa score: 0.953
- ------ Step 1/5: Slice 3/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 2152 synthetic samples
- -> test with 'LR'
- LR tn, fp: 537, 23
- LR fn, tp: 0, 21
- LR f1 score: 0.646
- LR cohens kappa score: 0.628
- LR average precision score: 0.841
- -> test with 'GB'
- GB tn, fp: 560, 0
- GB fn, tp: 1, 20
- GB f1 score: 0.976
- GB cohens kappa score: 0.975
- -> test with 'KNN'
- KNN tn, fp: 553, 7
- KNN fn, tp: 0, 21
- KNN f1 score: 0.857
- KNN cohens kappa score: 0.851
- ------ Step 1/5: Slice 4/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 2152 synthetic samples
- -> test with 'LR'
- LR tn, fp: 543, 17
- LR fn, tp: 1, 20
- LR f1 score: 0.690
- LR cohens kappa score: 0.675
- LR average precision score: 0.883
- -> test with 'GB'
- GB tn, fp: 557, 3
- GB fn, tp: 0, 21
- GB f1 score: 0.933
- GB cohens kappa score: 0.931
- -> test with 'KNN'
- KNN tn, fp: 553, 7
- KNN fn, tp: 0, 21
- KNN f1 score: 0.857
- KNN cohens kappa score: 0.851
- ------ Step 1/5: Slice 5/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 2156 synthetic samples
- -> test with 'LR'
- LR tn, fp: 538, 18
- LR fn, tp: 0, 21
- LR f1 score: 0.700
- LR cohens kappa score: 0.685
- LR average precision score: 0.980
- -> test with 'GB'
- GB tn, fp: 555, 1
- GB fn, tp: 1, 20
- GB f1 score: 0.952
- GB cohens kappa score: 0.951
- -> test with 'KNN'
- KNN tn, fp: 550, 6
- KNN fn, tp: 0, 21
- KNN f1 score: 0.875
- KNN cohens kappa score: 0.870
- ====== Step 2/5 =======
- -> Shuffling data
- -> Spliting data to slices
- ------ Step 2/5: Slice 1/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 2152 synthetic samples
- -> test with 'LR'
- LR tn, fp: 550, 10
- LR fn, tp: 1, 20
- LR f1 score: 0.784
- LR cohens kappa score: 0.775
- LR average precision score: 0.931
- -> test with 'GB'
- GB tn, fp: 560, 0
- GB fn, tp: 0, 21
- GB f1 score: 1.000
- GB cohens kappa score: 1.000
- -> test with 'KNN'
- KNN tn, fp: 550, 10
- KNN fn, tp: 0, 21
- KNN f1 score: 0.808
- KNN cohens kappa score: 0.799
- ------ Step 2/5: Slice 2/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 2152 synthetic samples
- -> test with 'LR'
- LR tn, fp: 551, 9
- LR fn, tp: 2, 19
- LR f1 score: 0.776
- LR cohens kappa score: 0.766
- LR average precision score: 0.923
- -> test with 'GB'
- GB tn, fp: 559, 1
- GB fn, tp: 2, 19
- GB f1 score: 0.927
- GB cohens kappa score: 0.924
- -> test with 'KNN'
- KNN tn, fp: 555, 5
- KNN fn, tp: 1, 20
- KNN f1 score: 0.870
- KNN cohens kappa score: 0.864
- ------ Step 2/5: Slice 3/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 2152 synthetic samples
- -> test with 'LR'
- LR tn, fp: 543, 17
- LR fn, tp: 0, 21
- LR f1 score: 0.712
- LR cohens kappa score: 0.698
- LR average precision score: 0.909
- -> test with 'GB'
- GB tn, fp: 560, 0
- GB fn, tp: 1, 20
- GB f1 score: 0.976
- GB cohens kappa score: 0.975
- -> test with 'KNN'
- KNN tn, fp: 558, 2
- KNN fn, tp: 1, 20
- KNN f1 score: 0.930
- KNN cohens kappa score: 0.928
- ------ Step 2/5: Slice 4/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 2152 synthetic samples
- -> test with 'LR'
- LR tn, fp: 539, 21
- LR fn, tp: 0, 21
- LR f1 score: 0.667
- LR cohens kappa score: 0.650
- LR average precision score: 0.883
- -> test with 'GB'
- GB tn, fp: 559, 1
- GB fn, tp: 2, 19
- GB f1 score: 0.927
- GB cohens kappa score: 0.924
- -> test with 'KNN'
- KNN tn, fp: 552, 8
- KNN fn, tp: 0, 21
- KNN f1 score: 0.840
- KNN cohens kappa score: 0.833
- ------ Step 2/5: Slice 5/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 2156 synthetic samples
- -> test with 'LR'
- LR tn, fp: 535, 21
- LR fn, tp: 0, 21
- LR f1 score: 0.667
- LR cohens kappa score: 0.650
- LR average precision score: 0.872
- -> test with 'GB'
- GB tn, fp: 556, 0
- GB fn, tp: 2, 19
- GB f1 score: 0.950
- GB cohens kappa score: 0.948
- -> test with 'KNN'
- KNN tn, fp: 553, 3
- KNN fn, tp: 0, 21
- KNN f1 score: 0.933
- KNN cohens kappa score: 0.931
- ====== Step 3/5 =======
- -> Shuffling data
- -> Spliting data to slices
- ------ Step 3/5: Slice 1/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 2152 synthetic samples
- -> test with 'LR'
- LR tn, fp: 551, 9
- LR fn, tp: 0, 21
- LR f1 score: 0.824
- LR cohens kappa score: 0.816
- LR average precision score: 0.957
- -> test with 'GB'
- GB tn, fp: 559, 1
- GB fn, tp: 1, 20
- GB f1 score: 0.952
- GB cohens kappa score: 0.951
- -> test with 'KNN'
- KNN tn, fp: 551, 9
- KNN fn, tp: 0, 21
- KNN f1 score: 0.824
- KNN cohens kappa score: 0.816
- ------ Step 3/5: Slice 2/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 2152 synthetic samples
- -> test with 'LR'
- LR tn, fp: 555, 5
- LR fn, tp: 1, 20
- LR f1 score: 0.870
- LR cohens kappa score: 0.864
- LR average precision score: 0.902
- -> test with 'GB'
- GB tn, fp: 560, 0
- GB fn, tp: 2, 19
- GB f1 score: 0.950
- GB cohens kappa score: 0.948
- -> test with 'KNN'
- KNN tn, fp: 556, 4
- KNN fn, tp: 0, 21
- KNN f1 score: 0.913
- KNN cohens kappa score: 0.909
- ------ Step 3/5: Slice 3/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 2152 synthetic samples
- -> test with 'LR'
- LR tn, fp: 542, 18
- LR fn, tp: 1, 20
- LR f1 score: 0.678
- LR cohens kappa score: 0.662
- LR average precision score: 0.873
- -> test with 'GB'
- GB tn, fp: 560, 0
- GB fn, tp: 2, 19
- GB f1 score: 0.950
- GB cohens kappa score: 0.948
- -> test with 'KNN'
- KNN tn, fp: 551, 9
- KNN fn, tp: 0, 21
- KNN f1 score: 0.824
- KNN cohens kappa score: 0.816
- ------ Step 3/5: Slice 4/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 2152 synthetic samples
- -> test with 'LR'
- LR tn, fp: 541, 19
- LR fn, tp: 1, 20
- LR f1 score: 0.667
- LR cohens kappa score: 0.650
- LR average precision score: 0.931
- -> test with 'GB'
- GB tn, fp: 560, 0
- GB fn, tp: 0, 21
- GB f1 score: 1.000
- GB cohens kappa score: 1.000
- -> test with 'KNN'
- KNN tn, fp: 556, 4
- KNN fn, tp: 0, 21
- KNN f1 score: 0.913
- KNN cohens kappa score: 0.909
- ------ Step 3/5: Slice 5/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 2156 synthetic samples
- -> test with 'LR'
- LR tn, fp: 536, 20
- LR fn, tp: 0, 21
- LR f1 score: 0.677
- LR cohens kappa score: 0.661
- LR average precision score: 0.940
- -> test with 'GB'
- GB tn, fp: 554, 2
- GB fn, tp: 0, 21
- GB f1 score: 0.955
- GB cohens kappa score: 0.953
- -> test with 'KNN'
- KNN tn, fp: 545, 11
- KNN fn, tp: 0, 21
- KNN f1 score: 0.792
- KNN cohens kappa score: 0.783
- ====== Step 4/5 =======
- -> Shuffling data
- -> Spliting data to slices
- ------ Step 4/5: Slice 1/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 2152 synthetic samples
- -> test with 'LR'
- LR tn, fp: 548, 12
- LR fn, tp: 1, 20
- LR f1 score: 0.755
- LR cohens kappa score: 0.744
- LR average precision score: 0.931
- -> test with 'GB'
- GB tn, fp: 558, 2
- GB fn, tp: 0, 21
- GB f1 score: 0.955
- GB cohens kappa score: 0.953
- -> test with 'KNN'
- KNN tn, fp: 552, 8
- KNN fn, tp: 0, 21
- KNN f1 score: 0.840
- KNN cohens kappa score: 0.833
- ------ Step 4/5: Slice 2/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 2152 synthetic samples
- -> test with 'LR'
- LR tn, fp: 536, 24
- LR fn, tp: 0, 21
- LR f1 score: 0.636
- LR cohens kappa score: 0.618
- LR average precision score: 0.946
- -> test with 'GB'
- GB tn, fp: 560, 0
- GB fn, tp: 0, 21
- GB f1 score: 1.000
- GB cohens kappa score: 1.000
- -> test with 'KNN'
- KNN tn, fp: 553, 7
- KNN fn, tp: 0, 21
- KNN f1 score: 0.857
- KNN cohens kappa score: 0.851
- ------ Step 4/5: Slice 3/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 2152 synthetic samples
- -> test with 'LR'
- LR tn, fp: 547, 13
- LR fn, tp: 5, 16
- LR f1 score: 0.640
- LR cohens kappa score: 0.624
- LR average precision score: 0.794
- -> test with 'GB'
- GB tn, fp: 560, 0
- GB fn, tp: 4, 17
- GB f1 score: 0.895
- GB cohens kappa score: 0.891
- -> test with 'KNN'
- KNN tn, fp: 553, 7
- KNN fn, tp: 1, 20
- KNN f1 score: 0.833
- KNN cohens kappa score: 0.826
- ------ Step 4/5: Slice 4/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 2152 synthetic samples
- -> test with 'LR'
- LR tn, fp: 541, 19
- LR fn, tp: 0, 21
- LR f1 score: 0.689
- LR cohens kappa score: 0.673
- LR average precision score: 0.910
- -> test with 'GB'
- GB tn, fp: 559, 1
- GB fn, tp: 1, 20
- GB f1 score: 0.952
- GB cohens kappa score: 0.951
- -> test with 'KNN'
- KNN tn, fp: 554, 6
- KNN fn, tp: 0, 21
- KNN f1 score: 0.875
- KNN cohens kappa score: 0.870
- ------ Step 4/5: Slice 5/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 2156 synthetic samples
- -> test with 'LR'
- LR tn, fp: 548, 8
- LR fn, tp: 1, 20
- LR f1 score: 0.816
- LR cohens kappa score: 0.808
- LR average precision score: 0.930
- -> test with 'GB'
- GB tn, fp: 556, 0
- GB fn, tp: 2, 19
- GB f1 score: 0.950
- GB cohens kappa score: 0.948
- -> test with 'KNN'
- KNN tn, fp: 551, 5
- KNN fn, tp: 0, 21
- KNN f1 score: 0.894
- KNN cohens kappa score: 0.889
- ====== Step 5/5 =======
- -> Shuffling data
- -> Spliting data to slices
- ------ Step 5/5: Slice 1/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 2152 synthetic samples
- -> test with 'LR'
- LR tn, fp: 544, 16
- LR fn, tp: 0, 21
- LR f1 score: 0.724
- LR cohens kappa score: 0.711
- LR average precision score: 0.970
- -> test with 'GB'
- GB tn, fp: 559, 1
- GB fn, tp: 1, 20
- GB f1 score: 0.952
- GB cohens kappa score: 0.951
- -> test with 'KNN'
- KNN tn, fp: 555, 5
- KNN fn, tp: 0, 21
- KNN f1 score: 0.894
- KNN cohens kappa score: 0.889
- ------ Step 5/5: Slice 2/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 2152 synthetic samples
- -> test with 'LR'
- LR tn, fp: 549, 11
- LR fn, tp: 1, 20
- LR f1 score: 0.769
- LR cohens kappa score: 0.759
- LR average precision score: 0.911
- -> test with 'GB'
- GB tn, fp: 560, 0
- GB fn, tp: 4, 17
- GB f1 score: 0.895
- GB cohens kappa score: 0.891
- -> test with 'KNN'
- KNN tn, fp: 556, 4
- KNN fn, tp: 1, 20
- KNN f1 score: 0.889
- KNN cohens kappa score: 0.884
- ------ Step 5/5: Slice 3/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 2152 synthetic samples
- -> test with 'LR'
- LR tn, fp: 546, 14
- LR fn, tp: 1, 20
- LR f1 score: 0.727
- LR cohens kappa score: 0.715
- LR average precision score: 0.878
- -> test with 'GB'
- GB tn, fp: 560, 0
- GB fn, tp: 0, 21
- GB f1 score: 1.000
- GB cohens kappa score: 1.000
- -> test with 'KNN'
- KNN tn, fp: 553, 7
- KNN fn, tp: 0, 21
- KNN f1 score: 0.857
- KNN cohens kappa score: 0.851
- ------ Step 5/5: Slice 4/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 2152 synthetic samples
- -> test with 'LR'
- LR tn, fp: 544, 16
- LR fn, tp: 1, 20
- LR f1 score: 0.702
- LR cohens kappa score: 0.687
- LR average precision score: 0.908
- -> test with 'GB'
- GB tn, fp: 558, 2
- GB fn, tp: 1, 20
- GB f1 score: 0.930
- GB cohens kappa score: 0.928
- -> test with 'KNN'
- KNN tn, fp: 549, 11
- KNN fn, tp: 1, 20
- KNN f1 score: 0.769
- KNN cohens kappa score: 0.759
- ------ Step 5/5: Slice 5/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 2156 synthetic samples
- -> test with 'LR'
- LR tn, fp: 543, 13
- LR fn, tp: 1, 20
- LR f1 score: 0.741
- LR cohens kappa score: 0.729
- LR average precision score: 0.914
- -> test with 'GB'
- GB tn, fp: 556, 0
- GB fn, tp: 0, 21
- GB f1 score: 1.000
- GB cohens kappa score: 1.000
- -> test with 'KNN'
- KNN tn, fp: 549, 7
- KNN fn, tp: 0, 21
- KNN f1 score: 0.857
- KNN cohens kappa score: 0.851
- ### Exercise is done.
- -----[ LR ]-----
- maximum:
- LR tn, fp: 555, 24
- LR fn, tp: 5, 21
- LR f1 score: 0.870
- LR cohens kappa score: 0.864
- LR average precision score: 0.980
- average:
- LR tn, fp: 544.2, 15.0
- LR fn, tp: 0.8, 20.2
- LR f1 score: 0.724
- LR cohens kappa score: 0.711
- LR average precision score: 0.908
- minimum:
- LR tn, fp: 535, 5
- LR fn, tp: 0, 16
- LR f1 score: 0.636
- LR cohens kappa score: 0.618
- LR average precision score: 0.794
- -----[ GB ]-----
- maximum:
- GB tn, fp: 560, 3
- GB fn, tp: 4, 21
- GB f1 score: 1.000
- GB cohens kappa score: 1.000
- average:
- GB tn, fp: 558.52, 0.68
- GB fn, tp: 1.2, 19.8
- GB f1 score: 0.954
- GB cohens kappa score: 0.953
- minimum:
- GB tn, fp: 554, 0
- GB fn, tp: 0, 17
- GB f1 score: 0.895
- GB cohens kappa score: 0.891
- -----[ KNN ]-----
- maximum:
- KNN tn, fp: 558, 11
- KNN fn, tp: 2, 21
- KNN f1 score: 0.955
- KNN cohens kappa score: 0.953
- average:
- KNN tn, fp: 552.72, 6.48
- KNN fn, tp: 0.28, 20.72
- KNN f1 score: 0.862
- KNN cohens kappa score: 0.856
- minimum:
- KNN tn, fp: 545, 2
- KNN fn, tp: 0, 19
- KNN f1 score: 0.769
- KNN cohens kappa score: 0.759
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