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- ///////////////////////////////////////////
- // Running convGAN on folding_abalone9-18
- ///////////////////////////////////////////
- Load 'data_input/folding_abalone9-18'
- from pickle file
- Data loaded.
- -> Shuffling data
- ### Start exercise for synthetic point generator
- ====== Step 1/5 =======
- -> Shuffling data
- -> Spliting data to slices
- ------ Step 1/5: Slice 1/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 124, 14
- LR fn, tp: 0, 9
- LR f1 score: 0.562
- LR cohens kappa score: 0.520
- LR average precision score: 0.892
- -> test with 'GB'
- GB tn, fp: 132, 6
- GB fn, tp: 5, 4
- GB f1 score: 0.421
- GB cohens kappa score: 0.381
- -> test with 'KNN'
- KNN tn, fp: 127, 11
- KNN fn, tp: 4, 5
- KNN f1 score: 0.400
- KNN cohens kappa score: 0.349
- ------ Step 1/5: Slice 2/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 129, 9
- LR fn, tp: 3, 6
- LR f1 score: 0.500
- LR cohens kappa score: 0.459
- LR average precision score: 0.575
- -> test with 'GB'
- GB tn, fp: 133, 5
- GB fn, tp: 6, 3
- GB f1 score: 0.353
- GB cohens kappa score: 0.313
- -> test with 'KNN'
- KNN tn, fp: 114, 24
- KNN fn, tp: 3, 6
- KNN f1 score: 0.308
- KNN cohens kappa score: 0.236
- ------ Step 1/5: Slice 3/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 126, 12
- LR fn, tp: 0, 9
- LR f1 score: 0.600
- LR cohens kappa score: 0.562
- LR average precision score: 0.826
- -> test with 'GB'
- GB tn, fp: 131, 7
- GB fn, tp: 6, 3
- GB f1 score: 0.316
- GB cohens kappa score: 0.269
- -> test with 'KNN'
- KNN tn, fp: 129, 9
- KNN fn, tp: 4, 5
- KNN f1 score: 0.435
- KNN cohens kappa score: 0.389
- ------ Step 1/5: Slice 4/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 126, 12
- LR fn, tp: 2, 7
- LR f1 score: 0.500
- LR cohens kappa score: 0.455
- LR average precision score: 0.542
- -> test with 'GB'
- GB tn, fp: 135, 3
- GB fn, tp: 5, 4
- GB f1 score: 0.500
- GB cohens kappa score: 0.472
- -> test with 'KNN'
- KNN tn, fp: 124, 14
- KNN fn, tp: 3, 6
- KNN f1 score: 0.414
- KNN cohens kappa score: 0.360
- ------ Step 1/5: Slice 5/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 516 synthetic samples
- -> test with 'LR'
- LR tn, fp: 129, 8
- LR fn, tp: 2, 4
- LR f1 score: 0.444
- LR cohens kappa score: 0.412
- LR average precision score: 0.489
- -> test with 'GB'
- GB tn, fp: 132, 5
- GB fn, tp: 4, 2
- GB f1 score: 0.308
- GB cohens kappa score: 0.275
- -> test with 'KNN'
- KNN tn, fp: 126, 11
- KNN fn, tp: 2, 4
- KNN f1 score: 0.381
- KNN cohens kappa score: 0.341
- ====== Step 2/5 =======
- -> Shuffling data
- -> Spliting data to slices
- ------ Step 2/5: Slice 1/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 119, 19
- LR fn, tp: 1, 8
- LR f1 score: 0.444
- LR cohens kappa score: 0.388
- LR average precision score: 0.624
- -> test with 'GB'
- GB tn, fp: 136, 2
- GB fn, tp: 5, 4
- GB f1 score: 0.533
- GB cohens kappa score: 0.509
- -> test with 'KNN'
- KNN tn, fp: 123, 15
- KNN fn, tp: 5, 4
- KNN f1 score: 0.286
- KNN cohens kappa score: 0.221
- ------ Step 2/5: Slice 2/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 131, 7
- LR fn, tp: 1, 8
- LR f1 score: 0.667
- LR cohens kappa score: 0.639
- LR average precision score: 0.782
- -> test with 'GB'
- GB tn, fp: 134, 4
- GB fn, tp: 5, 4
- GB f1 score: 0.471
- GB cohens kappa score: 0.438
- -> test with 'KNN'
- KNN tn, fp: 131, 7
- KNN fn, tp: 3, 6
- KNN f1 score: 0.545
- KNN cohens kappa score: 0.510
- ------ Step 2/5: Slice 3/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 130, 8
- LR fn, tp: 2, 7
- LR f1 score: 0.583
- LR cohens kappa score: 0.549
- LR average precision score: 0.728
- -> test with 'GB'
- GB tn, fp: 130, 8
- GB fn, tp: 5, 4
- GB f1 score: 0.381
- GB cohens kappa score: 0.334
- -> test with 'KNN'
- KNN tn, fp: 122, 16
- KNN fn, tp: 2, 7
- KNN f1 score: 0.438
- KNN cohens kappa score: 0.383
- ------ Step 2/5: Slice 4/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 125, 13
- LR fn, tp: 0, 9
- LR f1 score: 0.581
- LR cohens kappa score: 0.541
- LR average precision score: 0.720
- -> test with 'GB'
- GB tn, fp: 134, 4
- GB fn, tp: 5, 4
- GB f1 score: 0.471
- GB cohens kappa score: 0.438
- -> test with 'KNN'
- KNN tn, fp: 120, 18
- KNN fn, tp: 3, 6
- KNN f1 score: 0.364
- KNN cohens kappa score: 0.301
- ------ Step 2/5: Slice 5/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 516 synthetic samples
- -> test with 'LR'
- LR tn, fp: 122, 15
- LR fn, tp: 1, 5
- LR f1 score: 0.385
- LR cohens kappa score: 0.342
- LR average precision score: 0.571
- -> test with 'GB'
- GB tn, fp: 128, 9
- GB fn, tp: 3, 3
- GB f1 score: 0.333
- GB cohens kappa score: 0.294
- -> test with 'KNN'
- KNN tn, fp: 122, 15
- KNN fn, tp: 3, 3
- KNN f1 score: 0.250
- KNN cohens kappa score: 0.200
- ====== Step 3/5 =======
- -> Shuffling data
- -> Spliting data to slices
- ------ Step 3/5: Slice 1/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 129, 9
- LR fn, tp: 3, 6
- LR f1 score: 0.500
- LR cohens kappa score: 0.459
- LR average precision score: 0.609
- -> test with 'GB'
- GB tn, fp: 132, 6
- GB fn, tp: 7, 2
- GB f1 score: 0.235
- GB cohens kappa score: 0.189
- -> test with 'KNN'
- KNN tn, fp: 127, 11
- KNN fn, tp: 5, 4
- KNN f1 score: 0.333
- KNN cohens kappa score: 0.278
- ------ Step 3/5: Slice 2/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 132, 6
- LR fn, tp: 0, 9
- LR f1 score: 0.750
- LR cohens kappa score: 0.729
- LR average precision score: 0.897
- -> test with 'GB'
- GB tn, fp: 134, 4
- GB fn, tp: 2, 7
- GB f1 score: 0.700
- GB cohens kappa score: 0.678
- -> test with 'KNN'
- KNN tn, fp: 115, 23
- KNN fn, tp: 1, 8
- KNN f1 score: 0.400
- KNN cohens kappa score: 0.337
- ------ Step 3/5: Slice 3/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 130, 8
- LR fn, tp: 4, 5
- LR f1 score: 0.455
- LR cohens kappa score: 0.412
- LR average precision score: 0.648
- -> test with 'GB'
- GB tn, fp: 132, 6
- GB fn, tp: 7, 2
- GB f1 score: 0.235
- GB cohens kappa score: 0.189
- -> test with 'KNN'
- KNN tn, fp: 126, 12
- KNN fn, tp: 5, 4
- KNN f1 score: 0.320
- KNN cohens kappa score: 0.262
- ------ Step 3/5: Slice 4/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 117, 21
- LR fn, tp: 2, 7
- LR f1 score: 0.378
- LR cohens kappa score: 0.315
- LR average precision score: 0.656
- -> test with 'GB'
- GB tn, fp: 129, 9
- GB fn, tp: 6, 3
- GB f1 score: 0.286
- GB cohens kappa score: 0.232
- -> test with 'KNN'
- KNN tn, fp: 117, 21
- KNN fn, tp: 4, 5
- KNN f1 score: 0.286
- KNN cohens kappa score: 0.214
- ------ Step 3/5: Slice 5/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 516 synthetic samples
- -> test with 'LR'
- LR tn, fp: 127, 10
- LR fn, tp: 2, 4
- LR f1 score: 0.400
- LR cohens kappa score: 0.363
- LR average precision score: 0.530
- -> test with 'GB'
- GB tn, fp: 129, 8
- GB fn, tp: 4, 2
- GB f1 score: 0.250
- GB cohens kappa score: 0.208
- -> test with 'KNN'
- KNN tn, fp: 118, 19
- KNN fn, tp: 2, 4
- KNN f1 score: 0.276
- KNN cohens kappa score: 0.224
- ====== Step 4/5 =======
- -> Shuffling data
- -> Spliting data to slices
- ------ Step 4/5: Slice 1/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 129, 9
- LR fn, tp: 3, 6
- LR f1 score: 0.500
- LR cohens kappa score: 0.459
- LR average precision score: 0.567
- -> test with 'GB'
- GB tn, fp: 135, 3
- GB fn, tp: 6, 3
- GB f1 score: 0.400
- GB cohens kappa score: 0.369
- -> test with 'KNN'
- KNN tn, fp: 121, 17
- KNN fn, tp: 6, 3
- KNN f1 score: 0.207
- KNN cohens kappa score: 0.134
- ------ Step 4/5: Slice 2/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 124, 14
- LR fn, tp: 2, 7
- LR f1 score: 0.467
- LR cohens kappa score: 0.417
- LR average precision score: 0.706
- -> test with 'GB'
- GB tn, fp: 132, 6
- GB fn, tp: 4, 5
- GB f1 score: 0.500
- GB cohens kappa score: 0.464
- -> test with 'KNN'
- KNN tn, fp: 121, 17
- KNN fn, tp: 2, 7
- KNN f1 score: 0.424
- KNN cohens kappa score: 0.368
- ------ Step 4/5: Slice 3/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 128, 10
- LR fn, tp: 1, 8
- LR f1 score: 0.593
- LR cohens kappa score: 0.556
- LR average precision score: 0.673
- -> test with 'GB'
- GB tn, fp: 136, 2
- GB fn, tp: 5, 4
- GB f1 score: 0.533
- GB cohens kappa score: 0.509
- -> test with 'KNN'
- KNN tn, fp: 121, 17
- KNN fn, tp: 3, 6
- KNN f1 score: 0.375
- KNN cohens kappa score: 0.315
- ------ Step 4/5: Slice 4/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 123, 15
- LR fn, tp: 0, 9
- LR f1 score: 0.545
- LR cohens kappa score: 0.501
- LR average precision score: 0.967
- -> test with 'GB'
- GB tn, fp: 132, 6
- GB fn, tp: 5, 4
- GB f1 score: 0.421
- GB cohens kappa score: 0.381
- -> test with 'KNN'
- KNN tn, fp: 119, 19
- KNN fn, tp: 2, 7
- KNN f1 score: 0.400
- KNN cohens kappa score: 0.340
- ------ Step 4/5: Slice 5/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 516 synthetic samples
- -> test with 'LR'
- LR tn, fp: 131, 6
- LR fn, tp: 1, 5
- LR f1 score: 0.588
- LR cohens kappa score: 0.565
- LR average precision score: 0.517
- -> test with 'GB'
- GB tn, fp: 131, 6
- GB fn, tp: 4, 2
- GB f1 score: 0.286
- GB cohens kappa score: 0.250
- -> test with 'KNN'
- KNN tn, fp: 124, 13
- KNN fn, tp: 1, 5
- KNN f1 score: 0.417
- KNN cohens kappa score: 0.377
- ====== Step 5/5 =======
- -> Shuffling data
- -> Spliting data to slices
- ------ Step 5/5: Slice 1/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 123, 15
- LR fn, tp: 2, 7
- LR f1 score: 0.452
- LR cohens kappa score: 0.399
- LR average precision score: 0.692
- -> test with 'GB'
- GB tn, fp: 132, 6
- GB fn, tp: 8, 1
- GB f1 score: 0.125
- GB cohens kappa score: 0.075
- -> test with 'KNN'
- KNN tn, fp: 119, 19
- KNN fn, tp: 5, 4
- KNN f1 score: 0.250
- KNN cohens kappa score: 0.178
- ------ Step 5/5: Slice 2/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 126, 12
- LR fn, tp: 1, 8
- LR f1 score: 0.552
- LR cohens kappa score: 0.510
- LR average precision score: 0.707
- -> test with 'GB'
- GB tn, fp: 132, 6
- GB fn, tp: 6, 3
- GB f1 score: 0.333
- GB cohens kappa score: 0.290
- -> test with 'KNN'
- KNN tn, fp: 118, 20
- KNN fn, tp: 4, 5
- KNN f1 score: 0.294
- KNN cohens kappa score: 0.224
- ------ Step 5/5: Slice 3/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 124, 14
- LR fn, tp: 3, 6
- LR f1 score: 0.414
- LR cohens kappa score: 0.360
- LR average precision score: 0.447
- -> test with 'GB'
- GB tn, fp: 135, 3
- GB fn, tp: 5, 4
- GB f1 score: 0.500
- GB cohens kappa score: 0.472
- -> test with 'KNN'
- KNN tn, fp: 121, 17
- KNN fn, tp: 6, 3
- KNN f1 score: 0.207
- KNN cohens kappa score: 0.134
- ------ Step 5/5: Slice 4/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 127, 11
- LR fn, tp: 1, 8
- LR f1 score: 0.571
- LR cohens kappa score: 0.533
- LR average precision score: 0.849
- -> test with 'GB'
- GB tn, fp: 132, 6
- GB fn, tp: 4, 5
- GB f1 score: 0.500
- GB cohens kappa score: 0.464
- -> test with 'KNN'
- KNN tn, fp: 124, 14
- KNN fn, tp: 4, 5
- KNN f1 score: 0.357
- KNN cohens kappa score: 0.299
- ------ Step 5/5: Slice 5/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 516 synthetic samples
- -> test with 'LR'
- LR tn, fp: 130, 7
- LR fn, tp: 0, 6
- LR f1 score: 0.632
- LR cohens kappa score: 0.609
- LR average precision score: 0.850
- -> test with 'GB'
- GB tn, fp: 135, 2
- GB fn, tp: 3, 3
- GB f1 score: 0.545
- GB cohens kappa score: 0.527
- -> test with 'KNN'
- KNN tn, fp: 126, 11
- KNN fn, tp: 2, 4
- KNN f1 score: 0.381
- KNN cohens kappa score: 0.341
- ### Exercise is done.
- -----[ LR ]-----
- maximum:
- LR tn, fp: 132, 21
- LR fn, tp: 4, 9
- LR f1 score: 0.750
- LR cohens kappa score: 0.729
- LR average precision score: 0.967
- average:
- LR tn, fp: 126.44, 11.36
- LR fn, tp: 1.48, 6.92
- LR f1 score: 0.523
- LR cohens kappa score: 0.482
- LR average precision score: 0.683
- minimum:
- LR tn, fp: 117, 6
- LR fn, tp: 0, 4
- LR f1 score: 0.378
- LR cohens kappa score: 0.315
- LR average precision score: 0.447
- -----[ GB ]-----
- maximum:
- GB tn, fp: 136, 9
- GB fn, tp: 8, 7
- GB f1 score: 0.700
- GB cohens kappa score: 0.678
- average:
- GB tn, fp: 132.52, 5.28
- GB fn, tp: 5.0, 3.4
- GB f1 score: 0.397
- GB cohens kappa score: 0.361
- minimum:
- GB tn, fp: 128, 2
- GB fn, tp: 2, 1
- GB f1 score: 0.125
- GB cohens kappa score: 0.075
- -----[ KNN ]-----
- maximum:
- KNN tn, fp: 131, 24
- KNN fn, tp: 6, 8
- KNN f1 score: 0.545
- KNN cohens kappa score: 0.510
- average:
- KNN tn, fp: 122.2, 15.6
- KNN fn, tp: 3.36, 5.04
- KNN f1 score: 0.350
- KNN cohens kappa score: 0.293
- minimum:
- KNN tn, fp: 114, 7
- KNN fn, tp: 1, 3
- KNN f1 score: 0.207
- KNN cohens kappa score: 0.134
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