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- ///////////////////////////////////////////
- // Running convGAN-full on folding_abalone9-18
- ///////////////////////////////////////////
- Load 'data_input/folding_abalone9-18'
- from pickle file
- Data loaded.
- -> Shuffling data
- ### Start exercise for synthetic point generator
- ====== Step 1/5 =======
- -> Shuffling data
- -> Spliting data to slices
- ------ Step 1/5: Slice 1/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 119, 19
- LR fn, tp: 0, 9
- LR f1 score: 0.486
- LR cohens kappa score: 0.434
- LR average precision score: 0.879
- -> test with 'GB'
- GB tn, fp: 132, 6
- GB fn, tp: 6, 3
- GB f1 score: 0.333
- GB cohens kappa score: 0.290
- -> test with 'KNN'
- KNN tn, fp: 120, 18
- KNN fn, tp: 3, 6
- KNN f1 score: 0.364
- KNN cohens kappa score: 0.301
- ------ Step 1/5: Slice 2/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 130, 8
- LR fn, tp: 3, 6
- LR f1 score: 0.522
- LR cohens kappa score: 0.483
- LR average precision score: 0.581
- -> test with 'GB'
- GB tn, fp: 131, 7
- GB fn, tp: 5, 4
- GB f1 score: 0.400
- GB cohens kappa score: 0.357
- -> test with 'KNN'
- KNN tn, fp: 120, 18
- KNN fn, tp: 1, 8
- KNN f1 score: 0.457
- KNN cohens kappa score: 0.403
- ------ Step 1/5: Slice 3/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 129, 9
- LR fn, tp: 1, 8
- LR f1 score: 0.615
- LR cohens kappa score: 0.582
- LR average precision score: 0.809
- -> test with 'GB'
- GB tn, fp: 132, 6
- GB fn, tp: 4, 5
- GB f1 score: 0.500
- GB cohens kappa score: 0.464
- -> test with 'KNN'
- KNN tn, fp: 128, 10
- KNN fn, tp: 3, 6
- KNN f1 score: 0.480
- KNN cohens kappa score: 0.436
- ------ Step 1/5: Slice 4/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 132, 6
- LR fn, tp: 4, 5
- LR f1 score: 0.500
- LR cohens kappa score: 0.464
- LR average precision score: 0.582
- -> test with 'GB'
- GB tn, fp: 136, 2
- GB fn, tp: 6, 3
- GB f1 score: 0.429
- GB cohens kappa score: 0.402
- -> test with 'KNN'
- KNN tn, fp: 132, 6
- KNN fn, tp: 3, 6
- KNN f1 score: 0.571
- KNN cohens kappa score: 0.539
- ------ Step 1/5: Slice 5/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 516 synthetic samples
- -> test with 'LR'
- LR tn, fp: 127, 10
- LR fn, tp: 2, 4
- LR f1 score: 0.400
- LR cohens kappa score: 0.363
- LR average precision score: 0.452
- -> test with 'GB'
- GB tn, fp: 134, 3
- GB fn, tp: 4, 2
- GB f1 score: 0.364
- GB cohens kappa score: 0.338
- -> test with 'KNN'
- KNN tn, fp: 127, 10
- KNN fn, tp: 2, 4
- KNN f1 score: 0.400
- KNN cohens kappa score: 0.363
- ====== Step 2/5 =======
- -> Shuffling data
- -> Spliting data to slices
- ------ Step 2/5: Slice 1/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 122, 16
- LR fn, tp: 1, 8
- LR f1 score: 0.485
- LR cohens kappa score: 0.434
- LR average precision score: 0.651
- -> test with 'GB'
- GB tn, fp: 136, 2
- GB fn, tp: 5, 4
- GB f1 score: 0.533
- GB cohens kappa score: 0.509
- -> test with 'KNN'
- KNN tn, fp: 129, 9
- KNN fn, tp: 5, 4
- KNN f1 score: 0.364
- KNN cohens kappa score: 0.314
- ------ Step 2/5: Slice 2/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 133, 5
- LR fn, tp: 1, 8
- LR f1 score: 0.727
- LR cohens kappa score: 0.706
- LR average precision score: 0.783
- -> test with 'GB'
- GB tn, fp: 131, 7
- GB fn, tp: 5, 4
- GB f1 score: 0.400
- GB cohens kappa score: 0.357
- -> test with 'KNN'
- KNN tn, fp: 127, 11
- KNN fn, tp: 3, 6
- KNN f1 score: 0.462
- KNN cohens kappa score: 0.415
- ------ Step 2/5: Slice 3/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 128, 10
- LR fn, tp: 2, 7
- LR f1 score: 0.538
- LR cohens kappa score: 0.498
- LR average precision score: 0.653
- -> test with 'GB'
- GB tn, fp: 130, 8
- GB fn, tp: 5, 4
- GB f1 score: 0.381
- GB cohens kappa score: 0.334
- -> test with 'KNN'
- KNN tn, fp: 123, 15
- KNN fn, tp: 2, 7
- KNN f1 score: 0.452
- KNN cohens kappa score: 0.399
- ------ Step 2/5: Slice 4/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 128, 10
- LR fn, tp: 0, 9
- LR f1 score: 0.643
- LR cohens kappa score: 0.610
- LR average precision score: 0.719
- -> test with 'GB'
- GB tn, fp: 131, 7
- GB fn, tp: 6, 3
- GB f1 score: 0.316
- GB cohens kappa score: 0.269
- -> test with 'KNN'
- KNN tn, fp: 123, 15
- KNN fn, tp: 5, 4
- KNN f1 score: 0.286
- KNN cohens kappa score: 0.221
- ------ Step 2/5: Slice 5/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 516 synthetic samples
- -> test with 'LR'
- LR tn, fp: 128, 9
- LR fn, tp: 1, 5
- LR f1 score: 0.500
- LR cohens kappa score: 0.469
- LR average precision score: 0.660
- -> test with 'GB'
- GB tn, fp: 128, 9
- GB fn, tp: 3, 3
- GB f1 score: 0.333
- GB cohens kappa score: 0.294
- -> test with 'KNN'
- KNN tn, fp: 120, 17
- KNN fn, tp: 2, 4
- KNN f1 score: 0.296
- KNN cohens kappa score: 0.247
- ====== Step 3/5 =======
- -> Shuffling data
- -> Spliting data to slices
- ------ Step 3/5: Slice 1/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 128, 10
- LR fn, tp: 4, 5
- LR f1 score: 0.417
- LR cohens kappa score: 0.368
- LR average precision score: 0.556
- -> test with 'GB'
- GB tn, fp: 131, 7
- GB fn, tp: 7, 2
- GB f1 score: 0.222
- GB cohens kappa score: 0.171
- -> test with 'KNN'
- KNN tn, fp: 121, 17
- KNN fn, tp: 6, 3
- KNN f1 score: 0.207
- KNN cohens kappa score: 0.134
- ------ Step 3/5: Slice 2/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 133, 5
- LR fn, tp: 0, 9
- LR f1 score: 0.783
- LR cohens kappa score: 0.765
- LR average precision score: 0.906
- -> test with 'GB'
- GB tn, fp: 133, 5
- GB fn, tp: 2, 7
- GB f1 score: 0.667
- GB cohens kappa score: 0.642
- -> test with 'KNN'
- KNN tn, fp: 124, 14
- KNN fn, tp: 1, 8
- KNN f1 score: 0.516
- KNN cohens kappa score: 0.470
- ------ Step 3/5: Slice 3/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 133, 5
- LR fn, tp: 3, 6
- LR f1 score: 0.600
- LR cohens kappa score: 0.571
- LR average precision score: 0.693
- -> test with 'GB'
- GB tn, fp: 131, 7
- GB fn, tp: 7, 2
- GB f1 score: 0.222
- GB cohens kappa score: 0.171
- -> test with 'KNN'
- KNN tn, fp: 127, 11
- KNN fn, tp: 5, 4
- KNN f1 score: 0.333
- KNN cohens kappa score: 0.278
- ------ Step 3/5: Slice 4/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 120, 18
- LR fn, tp: 2, 7
- LR f1 score: 0.412
- LR cohens kappa score: 0.354
- LR average precision score: 0.630
- -> test with 'GB'
- GB tn, fp: 130, 8
- GB fn, tp: 6, 3
- GB f1 score: 0.300
- GB cohens kappa score: 0.249
- -> test with 'KNN'
- KNN tn, fp: 123, 15
- KNN fn, tp: 4, 5
- KNN f1 score: 0.345
- KNN cohens kappa score: 0.284
- ------ Step 3/5: Slice 5/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 516 synthetic samples
- -> test with 'LR'
- LR tn, fp: 128, 9
- LR fn, tp: 1, 5
- LR f1 score: 0.500
- LR cohens kappa score: 0.469
- LR average precision score: 0.564
- -> test with 'GB'
- GB tn, fp: 131, 6
- GB fn, tp: 3, 3
- GB f1 score: 0.400
- GB cohens kappa score: 0.368
- -> test with 'KNN'
- KNN tn, fp: 119, 18
- KNN fn, tp: 2, 4
- KNN f1 score: 0.286
- KNN cohens kappa score: 0.235
- ====== Step 4/5 =======
- -> Shuffling data
- -> Spliting data to slices
- ------ Step 4/5: Slice 1/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 129, 9
- LR fn, tp: 3, 6
- LR f1 score: 0.500
- LR cohens kappa score: 0.459
- LR average precision score: 0.547
- -> test with 'GB'
- GB tn, fp: 135, 3
- GB fn, tp: 6, 3
- GB f1 score: 0.400
- GB cohens kappa score: 0.369
- -> test with 'KNN'
- KNN tn, fp: 128, 10
- KNN fn, tp: 6, 3
- KNN f1 score: 0.273
- KNN cohens kappa score: 0.216
- ------ Step 4/5: Slice 2/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 126, 12
- LR fn, tp: 2, 7
- LR f1 score: 0.500
- LR cohens kappa score: 0.455
- LR average precision score: 0.732
- -> test with 'GB'
- GB tn, fp: 128, 10
- GB fn, tp: 4, 5
- GB f1 score: 0.417
- GB cohens kappa score: 0.368
- -> test with 'KNN'
- KNN tn, fp: 120, 18
- KNN fn, tp: 3, 6
- KNN f1 score: 0.364
- KNN cohens kappa score: 0.301
- ------ Step 4/5: Slice 3/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 125, 13
- LR fn, tp: 1, 8
- LR f1 score: 0.533
- LR cohens kappa score: 0.490
- LR average precision score: 0.664
- -> test with 'GB'
- GB tn, fp: 132, 6
- GB fn, tp: 4, 5
- GB f1 score: 0.500
- GB cohens kappa score: 0.464
- -> test with 'KNN'
- KNN tn, fp: 121, 17
- KNN fn, tp: 3, 6
- KNN f1 score: 0.375
- KNN cohens kappa score: 0.315
- ------ Step 4/5: Slice 4/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 123, 15
- LR fn, tp: 0, 9
- LR f1 score: 0.545
- LR cohens kappa score: 0.501
- LR average precision score: 0.906
- -> test with 'GB'
- GB tn, fp: 130, 8
- GB fn, tp: 6, 3
- GB f1 score: 0.300
- GB cohens kappa score: 0.249
- -> test with 'KNN'
- KNN tn, fp: 116, 22
- KNN fn, tp: 2, 7
- KNN f1 score: 0.368
- KNN cohens kappa score: 0.303
- ------ Step 4/5: Slice 5/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 516 synthetic samples
- -> test with 'LR'
- LR tn, fp: 131, 6
- LR fn, tp: 1, 5
- LR f1 score: 0.588
- LR cohens kappa score: 0.565
- LR average precision score: 0.510
- -> test with 'GB'
- GB tn, fp: 130, 7
- GB fn, tp: 4, 2
- GB f1 score: 0.267
- GB cohens kappa score: 0.228
- -> test with 'KNN'
- KNN tn, fp: 125, 12
- KNN fn, tp: 1, 5
- KNN f1 score: 0.435
- KNN cohens kappa score: 0.397
- ====== Step 5/5 =======
- -> Shuffling data
- -> Spliting data to slices
- ------ Step 5/5: Slice 1/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 125, 13
- LR fn, tp: 2, 7
- LR f1 score: 0.483
- LR cohens kappa score: 0.435
- LR average precision score: 0.693
- -> test with 'GB'
- GB tn, fp: 131, 7
- GB fn, tp: 7, 2
- GB f1 score: 0.222
- GB cohens kappa score: 0.171
- -> test with 'KNN'
- KNN tn, fp: 125, 13
- KNN fn, tp: 7, 2
- KNN f1 score: 0.167
- KNN cohens kappa score: 0.098
- ------ Step 5/5: Slice 2/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 127, 11
- LR fn, tp: 1, 8
- LR f1 score: 0.571
- LR cohens kappa score: 0.533
- LR average precision score: 0.677
- -> test with 'GB'
- GB tn, fp: 132, 6
- GB fn, tp: 6, 3
- GB f1 score: 0.333
- GB cohens kappa score: 0.290
- -> test with 'KNN'
- KNN tn, fp: 114, 24
- KNN fn, tp: 5, 4
- KNN f1 score: 0.216
- KNN cohens kappa score: 0.136
- ------ Step 5/5: Slice 3/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 129, 9
- LR fn, tp: 4, 5
- LR f1 score: 0.435
- LR cohens kappa score: 0.389
- LR average precision score: 0.532
- -> test with 'GB'
- GB tn, fp: 131, 7
- GB fn, tp: 7, 2
- GB f1 score: 0.222
- GB cohens kappa score: 0.171
- -> test with 'KNN'
- KNN tn, fp: 122, 16
- KNN fn, tp: 5, 4
- KNN f1 score: 0.276
- KNN cohens kappa score: 0.209
- ------ Step 5/5: Slice 4/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 131, 7
- LR fn, tp: 1, 8
- LR f1 score: 0.667
- LR cohens kappa score: 0.639
- LR average precision score: 0.841
- -> test with 'GB'
- GB tn, fp: 132, 6
- GB fn, tp: 5, 4
- GB f1 score: 0.421
- GB cohens kappa score: 0.381
- -> test with 'KNN'
- KNN tn, fp: 128, 10
- KNN fn, tp: 2, 7
- KNN f1 score: 0.538
- KNN cohens kappa score: 0.498
- ------ Step 5/5: Slice 5/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- -> create 516 synthetic samples
- -> test with 'LR'
- LR tn, fp: 129, 8
- LR fn, tp: 1, 5
- LR f1 score: 0.526
- LR cohens kappa score: 0.497
- LR average precision score: 0.809
- -> test with 'GB'
- GB tn, fp: 133, 4
- GB fn, tp: 3, 3
- GB f1 score: 0.462
- GB cohens kappa score: 0.436
- -> test with 'KNN'
- KNN tn, fp: 128, 9
- KNN fn, tp: 3, 3
- KNN f1 score: 0.333
- KNN cohens kappa score: 0.294
- ### Exercise is done.
- -----[ LR ]-----
- maximum:
- LR tn, fp: 133, 19
- LR fn, tp: 4, 9
- LR f1 score: 0.783
- LR cohens kappa score: 0.765
- LR average precision score: 0.906
- average:
- LR tn, fp: 127.72, 10.08
- LR fn, tp: 1.64, 6.76
- LR f1 score: 0.539
- LR cohens kappa score: 0.501
- LR average precision score: 0.681
- minimum:
- LR tn, fp: 119, 5
- LR fn, tp: 0, 4
- LR f1 score: 0.400
- LR cohens kappa score: 0.354
- LR average precision score: 0.452
- -----[ GB ]-----
- maximum:
- GB tn, fp: 136, 10
- GB fn, tp: 7, 7
- GB f1 score: 0.667
- GB cohens kappa score: 0.642
- average:
- GB tn, fp: 131.64, 6.16
- GB fn, tp: 5.04, 3.36
- GB f1 score: 0.374
- GB cohens kappa score: 0.334
- minimum:
- GB tn, fp: 128, 2
- GB fn, tp: 2, 2
- GB f1 score: 0.222
- GB cohens kappa score: 0.171
- -----[ KNN ]-----
- maximum:
- KNN tn, fp: 132, 24
- KNN fn, tp: 7, 8
- KNN f1 score: 0.571
- KNN cohens kappa score: 0.539
- average:
- KNN tn, fp: 123.6, 14.2
- KNN fn, tp: 3.36, 5.04
- KNN f1 score: 0.367
- KNN cohens kappa score: 0.312
- minimum:
- KNN tn, fp: 114, 6
- KNN fn, tp: 1, 2
- KNN f1 score: 0.167
- KNN cohens kappa score: 0.098
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