folding_abalone9-18.log 13 KB

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  1. ///////////////////////////////////////////
  2. // Running Repeater on folding_abalone9-18
  3. ///////////////////////////////////////////
  4. Load 'data_input/folding_abalone9-18'
  5. from pickle file
  6. Data loaded.
  7. -> Shuffling data
  8. ### Start exercise for synthetic point generator
  9. ====== Step 1/5 =======
  10. -> Shuffling data
  11. -> Spliting data to slices
  12. ------ Step 1/5: Slice 1/5 -------
  13. -> Reset the GAN
  14. -> Train generator for synthetic samples
  15. -> create 518 synthetic samples
  16. -> test with 'LR'
  17. LR tn, fp: 115, 23
  18. LR fn, tp: 0, 9
  19. LR f1 score: 0.439
  20. LR cohens kappa score: 0.380
  21. LR average precision score: 0.927
  22. -> test with 'GB'
  23. GB tn, fp: 134, 4
  24. GB fn, tp: 3, 6
  25. GB f1 score: 0.632
  26. GB cohens kappa score: 0.606
  27. -> test with 'KNN'
  28. KNN tn, fp: 124, 14
  29. KNN fn, tp: 5, 4
  30. KNN f1 score: 0.296
  31. KNN cohens kappa score: 0.234
  32. ------ Step 1/5: Slice 2/5 -------
  33. -> Reset the GAN
  34. -> Train generator for synthetic samples
  35. -> create 518 synthetic samples
  36. -> test with 'LR'
  37. LR tn, fp: 126, 12
  38. LR fn, tp: 3, 6
  39. LR f1 score: 0.444
  40. LR cohens kappa score: 0.395
  41. LR average precision score: 0.587
  42. -> test with 'GB'
  43. GB tn, fp: 131, 7
  44. GB fn, tp: 6, 3
  45. GB f1 score: 0.316
  46. GB cohens kappa score: 0.269
  47. -> test with 'KNN'
  48. KNN tn, fp: 122, 16
  49. KNN fn, tp: 5, 4
  50. KNN f1 score: 0.276
  51. KNN cohens kappa score: 0.209
  52. ------ Step 1/5: Slice 3/5 -------
  53. -> Reset the GAN
  54. -> Train generator for synthetic samples
  55. -> create 518 synthetic samples
  56. -> test with 'LR'
  57. LR tn, fp: 126, 12
  58. LR fn, tp: 1, 8
  59. LR f1 score: 0.552
  60. LR cohens kappa score: 0.510
  61. LR average precision score: 0.805
  62. -> test with 'GB'
  63. GB tn, fp: 135, 3
  64. GB fn, tp: 7, 2
  65. GB f1 score: 0.286
  66. GB cohens kappa score: 0.253
  67. -> test with 'KNN'
  68. KNN tn, fp: 126, 12
  69. KNN fn, tp: 4, 5
  70. KNN f1 score: 0.385
  71. KNN cohens kappa score: 0.331
  72. ------ Step 1/5: Slice 4/5 -------
  73. -> Reset the GAN
  74. -> Train generator for synthetic samples
  75. -> create 518 synthetic samples
  76. -> test with 'LR'
  77. LR tn, fp: 120, 18
  78. LR fn, tp: 2, 7
  79. LR f1 score: 0.412
  80. LR cohens kappa score: 0.354
  81. LR average precision score: 0.526
  82. -> test with 'GB'
  83. GB tn, fp: 137, 1
  84. GB fn, tp: 6, 3
  85. GB f1 score: 0.462
  86. GB cohens kappa score: 0.440
  87. -> test with 'KNN'
  88. KNN tn, fp: 124, 14
  89. KNN fn, tp: 2, 7
  90. KNN f1 score: 0.467
  91. KNN cohens kappa score: 0.417
  92. ------ Step 1/5: Slice 5/5 -------
  93. -> Reset the GAN
  94. -> Train generator for synthetic samples
  95. -> create 516 synthetic samples
  96. -> test with 'LR'
  97. LR tn, fp: 124, 13
  98. LR fn, tp: 1, 5
  99. LR f1 score: 0.417
  100. LR cohens kappa score: 0.377
  101. LR average precision score: 0.482
  102. -> test with 'GB'
  103. GB tn, fp: 132, 5
  104. GB fn, tp: 5, 1
  105. GB f1 score: 0.167
  106. GB cohens kappa score: 0.130
  107. -> test with 'KNN'
  108. KNN tn, fp: 127, 10
  109. KNN fn, tp: 3, 3
  110. KNN f1 score: 0.316
  111. KNN cohens kappa score: 0.274
  112. ====== Step 2/5 =======
  113. -> Shuffling data
  114. -> Spliting data to slices
  115. ------ Step 2/5: Slice 1/5 -------
  116. -> Reset the GAN
  117. -> Train generator for synthetic samples
  118. -> create 518 synthetic samples
  119. -> test with 'LR'
  120. LR tn, fp: 119, 19
  121. LR fn, tp: 1, 8
  122. LR f1 score: 0.444
  123. LR cohens kappa score: 0.388
  124. LR average precision score: 0.651
  125. -> test with 'GB'
  126. GB tn, fp: 133, 5
  127. GB fn, tp: 6, 3
  128. GB f1 score: 0.353
  129. GB cohens kappa score: 0.313
  130. -> test with 'KNN'
  131. KNN tn, fp: 130, 8
  132. KNN fn, tp: 5, 4
  133. KNN f1 score: 0.381
  134. KNN cohens kappa score: 0.334
  135. ------ Step 2/5: Slice 2/5 -------
  136. -> Reset the GAN
  137. -> Train generator for synthetic samples
  138. -> create 518 synthetic samples
  139. -> test with 'LR'
  140. LR tn, fp: 127, 11
  141. LR fn, tp: 1, 8
  142. LR f1 score: 0.571
  143. LR cohens kappa score: 0.533
  144. LR average precision score: 0.787
  145. -> test with 'GB'
  146. GB tn, fp: 135, 3
  147. GB fn, tp: 5, 4
  148. GB f1 score: 0.500
  149. GB cohens kappa score: 0.472
  150. -> test with 'KNN'
  151. KNN tn, fp: 125, 13
  152. KNN fn, tp: 4, 5
  153. KNN f1 score: 0.370
  154. KNN cohens kappa score: 0.314
  155. ------ Step 2/5: Slice 3/5 -------
  156. -> Reset the GAN
  157. -> Train generator for synthetic samples
  158. -> create 518 synthetic samples
  159. -> test with 'LR'
  160. LR tn, fp: 127, 11
  161. LR fn, tp: 2, 7
  162. LR f1 score: 0.519
  163. LR cohens kappa score: 0.476
  164. LR average precision score: 0.726
  165. -> test with 'GB'
  166. GB tn, fp: 131, 7
  167. GB fn, tp: 5, 4
  168. GB f1 score: 0.400
  169. GB cohens kappa score: 0.357
  170. -> test with 'KNN'
  171. KNN tn, fp: 119, 19
  172. KNN fn, tp: 3, 6
  173. KNN f1 score: 0.353
  174. KNN cohens kappa score: 0.289
  175. ------ Step 2/5: Slice 4/5 -------
  176. -> Reset the GAN
  177. -> Train generator for synthetic samples
  178. -> create 518 synthetic samples
  179. -> test with 'LR'
  180. LR tn, fp: 120, 18
  181. LR fn, tp: 0, 9
  182. LR f1 score: 0.500
  183. LR cohens kappa score: 0.449
  184. LR average precision score: 0.710
  185. -> test with 'GB'
  186. GB tn, fp: 130, 8
  187. GB fn, tp: 5, 4
  188. GB f1 score: 0.381
  189. GB cohens kappa score: 0.334
  190. -> test with 'KNN'
  191. KNN tn, fp: 124, 14
  192. KNN fn, tp: 4, 5
  193. KNN f1 score: 0.357
  194. KNN cohens kappa score: 0.299
  195. ------ Step 2/5: Slice 5/5 -------
  196. -> Reset the GAN
  197. -> Train generator for synthetic samples
  198. -> create 516 synthetic samples
  199. -> test with 'LR'
  200. LR tn, fp: 124, 13
  201. LR fn, tp: 1, 5
  202. LR f1 score: 0.417
  203. LR cohens kappa score: 0.377
  204. LR average precision score: 0.661
  205. -> test with 'GB'
  206. GB tn, fp: 129, 8
  207. GB fn, tp: 2, 4
  208. GB f1 score: 0.444
  209. GB cohens kappa score: 0.412
  210. -> test with 'KNN'
  211. KNN tn, fp: 124, 13
  212. KNN fn, tp: 2, 4
  213. KNN f1 score: 0.348
  214. KNN cohens kappa score: 0.305
  215. ====== Step 3/5 =======
  216. -> Shuffling data
  217. -> Spliting data to slices
  218. ------ Step 3/5: Slice 1/5 -------
  219. -> Reset the GAN
  220. -> Train generator for synthetic samples
  221. -> create 518 synthetic samples
  222. -> test with 'LR'
  223. LR tn, fp: 124, 14
  224. LR fn, tp: 2, 7
  225. LR f1 score: 0.467
  226. LR cohens kappa score: 0.417
  227. LR average precision score: 0.548
  228. -> test with 'GB'
  229. GB tn, fp: 133, 5
  230. GB fn, tp: 7, 2
  231. GB f1 score: 0.250
  232. GB cohens kappa score: 0.208
  233. -> test with 'KNN'
  234. KNN tn, fp: 121, 17
  235. KNN fn, tp: 3, 6
  236. KNN f1 score: 0.375
  237. KNN cohens kappa score: 0.315
  238. ------ Step 3/5: Slice 2/5 -------
  239. -> Reset the GAN
  240. -> Train generator for synthetic samples
  241. -> create 518 synthetic samples
  242. -> test with 'LR'
  243. LR tn, fp: 127, 11
  244. LR fn, tp: 0, 9
  245. LR f1 score: 0.621
  246. LR cohens kappa score: 0.586
  247. LR average precision score: 0.906
  248. -> test with 'GB'
  249. GB tn, fp: 134, 4
  250. GB fn, tp: 6, 3
  251. GB f1 score: 0.375
  252. GB cohens kappa score: 0.340
  253. -> test with 'KNN'
  254. KNN tn, fp: 119, 19
  255. KNN fn, tp: 3, 6
  256. KNN f1 score: 0.353
  257. KNN cohens kappa score: 0.289
  258. ------ Step 3/5: Slice 3/5 -------
  259. -> Reset the GAN
  260. -> Train generator for synthetic samples
  261. -> create 518 synthetic samples
  262. -> test with 'LR'
  263. LR tn, fp: 128, 10
  264. LR fn, tp: 4, 5
  265. LR f1 score: 0.417
  266. LR cohens kappa score: 0.368
  267. LR average precision score: 0.653
  268. -> test with 'GB'
  269. GB tn, fp: 133, 5
  270. GB fn, tp: 7, 2
  271. GB f1 score: 0.250
  272. GB cohens kappa score: 0.208
  273. -> test with 'KNN'
  274. KNN tn, fp: 126, 12
  275. KNN fn, tp: 6, 3
  276. KNN f1 score: 0.250
  277. KNN cohens kappa score: 0.188
  278. ------ Step 3/5: Slice 4/5 -------
  279. -> Reset the GAN
  280. -> Train generator for synthetic samples
  281. -> create 518 synthetic samples
  282. -> test with 'LR'
  283. LR tn, fp: 114, 24
  284. LR fn, tp: 2, 7
  285. LR f1 score: 0.350
  286. LR cohens kappa score: 0.282
  287. LR average precision score: 0.620
  288. -> test with 'GB'
  289. GB tn, fp: 132, 6
  290. GB fn, tp: 4, 5
  291. GB f1 score: 0.500
  292. GB cohens kappa score: 0.464
  293. -> test with 'KNN'
  294. KNN tn, fp: 122, 16
  295. KNN fn, tp: 4, 5
  296. KNN f1 score: 0.333
  297. KNN cohens kappa score: 0.271
  298. ------ Step 3/5: Slice 5/5 -------
  299. -> Reset the GAN
  300. -> Train generator for synthetic samples
  301. -> create 516 synthetic samples
  302. -> test with 'LR'
  303. LR tn, fp: 122, 15
  304. LR fn, tp: 1, 5
  305. LR f1 score: 0.385
  306. LR cohens kappa score: 0.342
  307. LR average precision score: 0.528
  308. -> test with 'GB'
  309. GB tn, fp: 132, 5
  310. GB fn, tp: 3, 3
  311. GB f1 score: 0.429
  312. GB cohens kappa score: 0.400
  313. -> test with 'KNN'
  314. KNN tn, fp: 126, 11
  315. KNN fn, tp: 3, 3
  316. KNN f1 score: 0.300
  317. KNN cohens kappa score: 0.256
  318. ====== Step 4/5 =======
  319. -> Shuffling data
  320. -> Spliting data to slices
  321. ------ Step 4/5: Slice 1/5 -------
  322. -> Reset the GAN
  323. -> Train generator for synthetic samples
  324. -> create 518 synthetic samples
  325. -> test with 'LR'
  326. LR tn, fp: 125, 13
  327. LR fn, tp: 4, 5
  328. LR f1 score: 0.370
  329. LR cohens kappa score: 0.314
  330. LR average precision score: 0.529
  331. -> test with 'GB'
  332. GB tn, fp: 131, 7
  333. GB fn, tp: 6, 3
  334. GB f1 score: 0.316
  335. GB cohens kappa score: 0.269
  336. -> test with 'KNN'
  337. KNN tn, fp: 124, 14
  338. KNN fn, tp: 5, 4
  339. KNN f1 score: 0.296
  340. KNN cohens kappa score: 0.234
  341. ------ Step 4/5: Slice 2/5 -------
  342. -> Reset the GAN
  343. -> Train generator for synthetic samples
  344. -> create 518 synthetic samples
  345. -> test with 'LR'
  346. LR tn, fp: 120, 18
  347. LR fn, tp: 2, 7
  348. LR f1 score: 0.412
  349. LR cohens kappa score: 0.354
  350. LR average precision score: 0.650
  351. -> test with 'GB'
  352. GB tn, fp: 126, 12
  353. GB fn, tp: 3, 6
  354. GB f1 score: 0.444
  355. GB cohens kappa score: 0.395
  356. -> test with 'KNN'
  357. KNN tn, fp: 124, 14
  358. KNN fn, tp: 2, 7
  359. KNN f1 score: 0.467
  360. KNN cohens kappa score: 0.417
  361. ------ Step 4/5: Slice 3/5 -------
  362. -> Reset the GAN
  363. -> Train generator for synthetic samples
  364. -> create 518 synthetic samples
  365. -> test with 'LR'
  366. LR tn, fp: 123, 15
  367. LR fn, tp: 1, 8
  368. LR f1 score: 0.500
  369. LR cohens kappa score: 0.452
  370. LR average precision score: 0.743
  371. -> test with 'GB'
  372. GB tn, fp: 131, 7
  373. GB fn, tp: 5, 4
  374. GB f1 score: 0.400
  375. GB cohens kappa score: 0.357
  376. -> test with 'KNN'
  377. KNN tn, fp: 128, 10
  378. KNN fn, tp: 5, 4
  379. KNN f1 score: 0.348
  380. KNN cohens kappa score: 0.295
  381. ------ Step 4/5: Slice 4/5 -------
  382. -> Reset the GAN
  383. -> Train generator for synthetic samples
  384. -> create 518 synthetic samples
  385. -> test with 'LR'
  386. LR tn, fp: 120, 18
  387. LR fn, tp: 0, 9
  388. LR f1 score: 0.500
  389. LR cohens kappa score: 0.449
  390. LR average precision score: 0.947
  391. -> test with 'GB'
  392. GB tn, fp: 132, 6
  393. GB fn, tp: 4, 5
  394. GB f1 score: 0.500
  395. GB cohens kappa score: 0.464
  396. -> test with 'KNN'
  397. KNN tn, fp: 122, 16
  398. KNN fn, tp: 3, 6
  399. KNN f1 score: 0.387
  400. KNN cohens kappa score: 0.329
  401. ------ Step 4/5: Slice 5/5 -------
  402. -> Reset the GAN
  403. -> Train generator for synthetic samples
  404. -> create 516 synthetic samples
  405. -> test with 'LR'
  406. LR tn, fp: 124, 13
  407. LR fn, tp: 1, 5
  408. LR f1 score: 0.417
  409. LR cohens kappa score: 0.377
  410. LR average precision score: 0.589
  411. -> test with 'GB'
  412. GB tn, fp: 133, 4
  413. GB fn, tp: 4, 2
  414. GB f1 score: 0.333
  415. GB cohens kappa score: 0.304
  416. -> test with 'KNN'
  417. KNN tn, fp: 121, 16
  418. KNN fn, tp: 2, 4
  419. KNN f1 score: 0.308
  420. KNN cohens kappa score: 0.260
  421. ====== Step 5/5 =======
  422. -> Shuffling data
  423. -> Spliting data to slices
  424. ------ Step 5/5: Slice 1/5 -------
  425. -> Reset the GAN
  426. -> Train generator for synthetic samples
  427. -> create 518 synthetic samples
  428. -> test with 'LR'
  429. LR tn, fp: 116, 22
  430. LR fn, tp: 2, 7
  431. LR f1 score: 0.368
  432. LR cohens kappa score: 0.303
  433. LR average precision score: 0.690
  434. -> test with 'GB'
  435. GB tn, fp: 133, 5
  436. GB fn, tp: 7, 2
  437. GB f1 score: 0.250
  438. GB cohens kappa score: 0.208
  439. -> test with 'KNN'
  440. KNN tn, fp: 123, 15
  441. KNN fn, tp: 5, 4
  442. KNN f1 score: 0.286
  443. KNN cohens kappa score: 0.221
  444. ------ Step 5/5: Slice 2/5 -------
  445. -> Reset the GAN
  446. -> Train generator for synthetic samples
  447. -> create 518 synthetic samples
  448. -> test with 'LR'
  449. LR tn, fp: 122, 16
  450. LR fn, tp: 1, 8
  451. LR f1 score: 0.485
  452. LR cohens kappa score: 0.434
  453. LR average precision score: 0.680
  454. -> test with 'GB'
  455. GB tn, fp: 133, 5
  456. GB fn, tp: 4, 5
  457. GB f1 score: 0.526
  458. GB cohens kappa score: 0.494
  459. -> test with 'KNN'
  460. KNN tn, fp: 122, 16
  461. KNN fn, tp: 4, 5
  462. KNN f1 score: 0.333
  463. KNN cohens kappa score: 0.271
  464. ------ Step 5/5: Slice 3/5 -------
  465. -> Reset the GAN
  466. -> Train generator for synthetic samples
  467. -> create 518 synthetic samples
  468. -> test with 'LR'
  469. LR tn, fp: 123, 15
  470. LR fn, tp: 3, 6
  471. LR f1 score: 0.400
  472. LR cohens kappa score: 0.344
  473. LR average precision score: 0.521
  474. -> test with 'GB'
  475. GB tn, fp: 132, 6
  476. GB fn, tp: 7, 2
  477. GB f1 score: 0.235
  478. GB cohens kappa score: 0.189
  479. -> test with 'KNN'
  480. KNN tn, fp: 124, 14
  481. KNN fn, tp: 5, 4
  482. KNN f1 score: 0.296
  483. KNN cohens kappa score: 0.234
  484. ------ Step 5/5: Slice 4/5 -------
  485. -> Reset the GAN
  486. -> Train generator for synthetic samples
  487. -> create 518 synthetic samples
  488. -> test with 'LR'
  489. LR tn, fp: 123, 15
  490. LR fn, tp: 1, 8
  491. LR f1 score: 0.500
  492. LR cohens kappa score: 0.452
  493. LR average precision score: 0.878
  494. -> test with 'GB'
  495. GB tn, fp: 133, 5
  496. GB fn, tp: 3, 6
  497. GB f1 score: 0.600
  498. GB cohens kappa score: 0.571
  499. -> test with 'KNN'
  500. KNN tn, fp: 126, 12
  501. KNN fn, tp: 4, 5
  502. KNN f1 score: 0.385
  503. KNN cohens kappa score: 0.331
  504. ------ Step 5/5: Slice 5/5 -------
  505. -> Reset the GAN
  506. -> Train generator for synthetic samples
  507. -> create 516 synthetic samples
  508. -> test with 'LR'
  509. LR tn, fp: 127, 10
  510. LR fn, tp: 0, 6
  511. LR f1 score: 0.545
  512. LR cohens kappa score: 0.516
  513. LR average precision score: 0.819
  514. -> test with 'GB'
  515. GB tn, fp: 134, 3
  516. GB fn, tp: 4, 2
  517. GB f1 score: 0.364
  518. GB cohens kappa score: 0.338
  519. -> test with 'KNN'
  520. KNN tn, fp: 124, 13
  521. KNN fn, tp: 3, 3
  522. KNN f1 score: 0.273
  523. KNN cohens kappa score: 0.225
  524. ### Exercise is done.
  525. -----[ LR ]-----
  526. maximum:
  527. LR tn, fp: 128, 24
  528. LR fn, tp: 4, 9
  529. LR f1 score: 0.621
  530. LR cohens kappa score: 0.586
  531. LR average precision score: 0.947
  532. average:
  533. LR tn, fp: 122.64, 15.16
  534. LR fn, tp: 1.44, 6.96
  535. LR f1 score: 0.458
  536. LR cohens kappa score: 0.409
  537. LR average precision score: 0.687
  538. minimum:
  539. LR tn, fp: 114, 10
  540. LR fn, tp: 0, 5
  541. LR f1 score: 0.350
  542. LR cohens kappa score: 0.282
  543. LR average precision score: 0.482
  544. -----[ GB ]-----
  545. maximum:
  546. GB tn, fp: 137, 12
  547. GB fn, tp: 7, 6
  548. GB f1 score: 0.632
  549. GB cohens kappa score: 0.606
  550. average:
  551. GB tn, fp: 132.36, 5.44
  552. GB fn, tp: 4.96, 3.44
  553. GB f1 score: 0.388
  554. GB cohens kappa score: 0.352
  555. minimum:
  556. GB tn, fp: 126, 1
  557. GB fn, tp: 2, 1
  558. GB f1 score: 0.167
  559. GB cohens kappa score: 0.130
  560. -----[ KNN ]-----
  561. maximum:
  562. KNN tn, fp: 130, 19
  563. KNN fn, tp: 6, 7
  564. KNN f1 score: 0.467
  565. KNN cohens kappa score: 0.417
  566. average:
  567. KNN tn, fp: 123.88, 13.92
  568. KNN fn, tp: 3.76, 4.64
  569. KNN f1 score: 0.342
  570. KNN cohens kappa score: 0.286
  571. minimum:
  572. KNN tn, fp: 119, 8
  573. KNN fn, tp: 2, 3
  574. KNN f1 score: 0.250
  575. KNN cohens kappa score: 0.188