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- ///////////////////////////////////////////
- // Running SimpleGAN on folding_abalone9-18
- ///////////////////////////////////////////
- Load 'data_input/folding_abalone9-18'
- from pickle file
- Data loaded.
- -> Shuffling data
- ### Start exercise for synthetic point generator
- ====== Step 1/5 =======
- -> Shuffling data
- -> Spliting data to slices
- ------ Step 1/5: Slice 1/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- Epoch 1/3
- Epoch 2/3
- Epoch 3/3
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 137, 1
- LR fn, tp: 2, 7
- LR f1 score: 0.824
- LR cohens kappa score: 0.813
- LR average precision score: 0.917
- -> test with 'GB'
- GB tn, fp: 133, 5
- GB fn, tp: 6, 3
- GB f1 score: 0.353
- GB cohens kappa score: 0.313
- -> test with 'KNN'
- KNN tn, fp: 138, 0
- KNN fn, tp: 9, 0
- KNN f1 score: 0.000
- KNN cohens kappa score: 0.000
- ------ Step 1/5: Slice 2/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- Epoch 1/3
- Epoch 2/3
- Epoch 3/3
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 136, 2
- LR fn, tp: 5, 4
- LR f1 score: 0.533
- LR cohens kappa score: 0.509
- LR average precision score: 0.646
- -> test with 'GB'
- GB tn, fp: 136, 2
- GB fn, tp: 6, 3
- GB f1 score: 0.429
- GB cohens kappa score: 0.402
- -> test with 'KNN'
- KNN tn, fp: 138, 0
- KNN fn, tp: 9, 0
- KNN f1 score: 0.000
- KNN cohens kappa score: 0.000
- ------ Step 1/5: Slice 3/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- Epoch 1/3
- Epoch 2/3
- Epoch 3/3
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 137, 1
- LR fn, tp: 5, 4
- LR f1 score: 0.571
- LR cohens kappa score: 0.552
- LR average precision score: 0.716
- -> test with 'GB'
- GB tn, fp: 136, 2
- GB fn, tp: 6, 3
- GB f1 score: 0.429
- GB cohens kappa score: 0.402
- -> test with 'KNN'
- KNN tn, fp: 138, 0
- KNN fn, tp: 9, 0
- KNN f1 score: 0.000
- KNN cohens kappa score: 0.000
- ------ Step 1/5: Slice 4/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- Epoch 1/3
- Epoch 2/3
- Epoch 3/3
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 135, 3
- LR fn, tp: 6, 3
- LR f1 score: 0.400
- LR cohens kappa score: 0.369
- LR average precision score: 0.527
- -> test with 'GB'
- GB tn, fp: 134, 4
- GB fn, tp: 4, 5
- GB f1 score: 0.556
- GB cohens kappa score: 0.527
- -> test with 'KNN'
- KNN tn, fp: 138, 0
- KNN fn, tp: 9, 0
- KNN f1 score: 0.000
- KNN cohens kappa score: 0.000
- ------ Step 1/5: Slice 5/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- Epoch 1/3
- Epoch 2/3
- Epoch 3/3
- -> create 516 synthetic samples
- -> test with 'LR'
- LR tn, fp: 134, 3
- LR fn, tp: 4, 2
- LR f1 score: 0.364
- LR cohens kappa score: 0.338
- LR average precision score: 0.530
- -> test with 'GB'
- GB tn, fp: 137, 0
- GB fn, tp: 6, 0
- GB f1 score: 0.000
- GB cohens kappa score: 0.000
- -> test with 'KNN'
- KNN tn, fp: 137, 0
- KNN fn, tp: 6, 0
- KNN f1 score: 0.000
- KNN cohens kappa score: 0.000
- ====== Step 2/5 =======
- -> Shuffling data
- -> Spliting data to slices
- ------ Step 2/5: Slice 1/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- Epoch 1/3
- Epoch 2/3
- Epoch 3/3
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 138, 0
- LR fn, tp: 6, 3
- LR f1 score: 0.500
- LR cohens kappa score: 0.484
- LR average precision score: 0.558
- -> test with 'GB'
- GB tn, fp: 135, 3
- GB fn, tp: 7, 2
- GB f1 score: 0.286
- GB cohens kappa score: 0.253
- -> test with 'KNN'
- KNN tn, fp: 138, 0
- KNN fn, tp: 9, 0
- KNN f1 score: 0.000
- KNN cohens kappa score: 0.000
- ------ Step 2/5: Slice 2/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- Epoch 1/3
- Epoch 2/3
- Epoch 3/3
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 136, 2
- LR fn, tp: 4, 5
- LR f1 score: 0.625
- LR cohens kappa score: 0.604
- LR average precision score: 0.720
- -> test with 'GB'
- GB tn, fp: 137, 1
- GB fn, tp: 5, 4
- GB f1 score: 0.571
- GB cohens kappa score: 0.552
- -> test with 'KNN'
- KNN tn, fp: 138, 0
- KNN fn, tp: 9, 0
- KNN f1 score: 0.000
- KNN cohens kappa score: 0.000
- ------ Step 2/5: Slice 3/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- Epoch 1/3
- Epoch 2/3
- Epoch 3/3
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 137, 1
- LR fn, tp: 5, 4
- LR f1 score: 0.571
- LR cohens kappa score: 0.552
- LR average precision score: 0.674
- -> test with 'GB'
- GB tn, fp: 135, 3
- GB fn, tp: 6, 3
- GB f1 score: 0.400
- GB cohens kappa score: 0.369
- -> test with 'KNN'
- KNN tn, fp: 138, 0
- KNN fn, tp: 9, 0
- KNN f1 score: 0.000
- KNN cohens kappa score: 0.000
- ------ Step 2/5: Slice 4/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- Epoch 1/3
- Epoch 2/3
- Epoch 3/3
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 137, 1
- LR fn, tp: 5, 4
- LR f1 score: 0.571
- LR cohens kappa score: 0.552
- LR average precision score: 0.717
- -> test with 'GB'
- GB tn, fp: 136, 2
- GB fn, tp: 5, 4
- GB f1 score: 0.533
- GB cohens kappa score: 0.509
- -> test with 'KNN'
- KNN tn, fp: 138, 0
- KNN fn, tp: 9, 0
- KNN f1 score: 0.000
- KNN cohens kappa score: 0.000
- ------ Step 2/5: Slice 5/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- Epoch 1/3
- Epoch 2/3
- Epoch 3/3
- -> create 516 synthetic samples
- -> test with 'LR'
- LR tn, fp: 135, 2
- LR fn, tp: 2, 4
- LR f1 score: 0.667
- LR cohens kappa score: 0.652
- LR average precision score: 0.719
- -> test with 'GB'
- GB tn, fp: 136, 1
- GB fn, tp: 4, 2
- GB f1 score: 0.444
- GB cohens kappa score: 0.428
- -> test with 'KNN'
- KNN tn, fp: 137, 0
- KNN fn, tp: 6, 0
- KNN f1 score: 0.000
- KNN cohens kappa score: 0.000
- ====== Step 3/5 =======
- -> Shuffling data
- -> Spliting data to slices
- ------ Step 3/5: Slice 1/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- Epoch 1/3
- Epoch 2/3
- Epoch 3/3
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 134, 4
- LR fn, tp: 6, 3
- LR f1 score: 0.375
- LR cohens kappa score: 0.340
- LR average precision score: 0.521
- -> test with 'GB'
- GB tn, fp: 135, 3
- GB fn, tp: 8, 1
- GB f1 score: 0.154
- GB cohens kappa score: 0.121
- -> test with 'KNN'
- KNN tn, fp: 138, 0
- KNN fn, tp: 9, 0
- KNN f1 score: 0.000
- KNN cohens kappa score: 0.000
- ------ Step 3/5: Slice 2/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- Epoch 1/3
- Epoch 2/3
- Epoch 3/3
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 137, 1
- LR fn, tp: 4, 5
- LR f1 score: 0.667
- LR cohens kappa score: 0.649
- LR average precision score: 0.825
- -> test with 'GB'
- GB tn, fp: 137, 1
- GB fn, tp: 6, 3
- GB f1 score: 0.462
- GB cohens kappa score: 0.440
- -> test with 'KNN'
- KNN tn, fp: 138, 0
- KNN fn, tp: 9, 0
- KNN f1 score: 0.000
- KNN cohens kappa score: 0.000
- ------ Step 3/5: Slice 3/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- Epoch 1/3
- Epoch 2/3
- Epoch 3/3
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 138, 0
- LR fn, tp: 5, 4
- LR f1 score: 0.615
- LR cohens kappa score: 0.600
- LR average precision score: 0.675
- -> test with 'GB'
- GB tn, fp: 136, 2
- GB fn, tp: 7, 2
- GB f1 score: 0.308
- GB cohens kappa score: 0.281
- -> test with 'KNN'
- KNN tn, fp: 138, 0
- KNN fn, tp: 9, 0
- KNN f1 score: 0.000
- KNN cohens kappa score: 0.000
- ------ Step 3/5: Slice 4/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- Epoch 1/3
- Epoch 2/3
- Epoch 3/3
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 136, 2
- LR fn, tp: 4, 5
- LR f1 score: 0.625
- LR cohens kappa score: 0.604
- LR average precision score: 0.790
- -> test with 'GB'
- GB tn, fp: 137, 1
- GB fn, tp: 6, 3
- GB f1 score: 0.462
- GB cohens kappa score: 0.440
- -> test with 'KNN'
- KNN tn, fp: 138, 0
- KNN fn, tp: 9, 0
- KNN f1 score: 0.000
- KNN cohens kappa score: 0.000
- ------ Step 3/5: Slice 5/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- Epoch 1/3
- Epoch 2/3
- Epoch 3/3
- -> create 516 synthetic samples
- -> test with 'LR'
- LR tn, fp: 135, 2
- LR fn, tp: 3, 3
- LR f1 score: 0.545
- LR cohens kappa score: 0.527
- LR average precision score: 0.550
- -> test with 'GB'
- GB tn, fp: 135, 2
- GB fn, tp: 3, 3
- GB f1 score: 0.545
- GB cohens kappa score: 0.527
- -> test with 'KNN'
- KNN tn, fp: 137, 0
- KNN fn, tp: 6, 0
- KNN f1 score: 0.000
- KNN cohens kappa score: 0.000
- ====== Step 4/5 =======
- -> Shuffling data
- -> Spliting data to slices
- ------ Step 4/5: Slice 1/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- Epoch 1/3
- Epoch 2/3
- Epoch 3/3
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 134, 4
- LR fn, tp: 5, 4
- LR f1 score: 0.471
- LR cohens kappa score: 0.438
- LR average precision score: 0.498
- -> test with 'GB'
- GB tn, fp: 137, 1
- GB fn, tp: 6, 3
- GB f1 score: 0.462
- GB cohens kappa score: 0.440
- -> test with 'KNN'
- KNN tn, fp: 138, 0
- KNN fn, tp: 9, 0
- KNN f1 score: 0.000
- KNN cohens kappa score: 0.000
- ------ Step 4/5: Slice 2/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- Epoch 1/3
- Epoch 2/3
- Epoch 3/3
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 135, 3
- LR fn, tp: 5, 4
- LR f1 score: 0.500
- LR cohens kappa score: 0.472
- LR average precision score: 0.656
- -> test with 'GB'
- GB tn, fp: 134, 4
- GB fn, tp: 5, 4
- GB f1 score: 0.471
- GB cohens kappa score: 0.438
- -> test with 'KNN'
- KNN tn, fp: 138, 0
- KNN fn, tp: 9, 0
- KNN f1 score: 0.000
- KNN cohens kappa score: 0.000
- ------ Step 4/5: Slice 3/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- Epoch 1/3
- Epoch 2/3
- Epoch 3/3
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 137, 1
- LR fn, tp: 4, 5
- LR f1 score: 0.667
- LR cohens kappa score: 0.649
- LR average precision score: 0.719
- -> test with 'GB'
- GB tn, fp: 135, 3
- GB fn, tp: 6, 3
- GB f1 score: 0.400
- GB cohens kappa score: 0.369
- -> test with 'KNN'
- KNN tn, fp: 138, 0
- KNN fn, tp: 9, 0
- KNN f1 score: 0.000
- KNN cohens kappa score: 0.000
- ------ Step 4/5: Slice 4/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- Epoch 1/3
- Epoch 2/3
- Epoch 3/3
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 137, 1
- LR fn, tp: 5, 4
- LR f1 score: 0.571
- LR cohens kappa score: 0.552
- LR average precision score: 0.879
- -> test with 'GB'
- GB tn, fp: 137, 1
- GB fn, tp: 6, 3
- GB f1 score: 0.462
- GB cohens kappa score: 0.440
- -> test with 'KNN'
- KNN tn, fp: 138, 0
- KNN fn, tp: 9, 0
- KNN f1 score: 0.000
- KNN cohens kappa score: 0.000
- ------ Step 4/5: Slice 5/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- Epoch 1/3
- Epoch 2/3
- Epoch 3/3
- -> create 516 synthetic samples
- -> test with 'LR'
- LR tn, fp: 135, 2
- LR fn, tp: 4, 2
- LR f1 score: 0.400
- LR cohens kappa score: 0.379
- LR average precision score: 0.605
- -> test with 'GB'
- GB tn, fp: 135, 2
- GB fn, tp: 5, 1
- GB f1 score: 0.222
- GB cohens kappa score: 0.200
- -> test with 'KNN'
- KNN tn, fp: 137, 0
- KNN fn, tp: 6, 0
- KNN f1 score: 0.000
- KNN cohens kappa score: 0.000
- ====== Step 5/5 =======
- -> Shuffling data
- -> Spliting data to slices
- ------ Step 5/5: Slice 1/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- Epoch 1/3
- Epoch 2/3
- Epoch 3/3
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 133, 5
- LR fn, tp: 5, 4
- LR f1 score: 0.444
- LR cohens kappa score: 0.408
- LR average precision score: 0.610
- -> test with 'GB'
- GB tn, fp: 133, 5
- GB fn, tp: 7, 2
- GB f1 score: 0.250
- GB cohens kappa score: 0.208
- -> test with 'KNN'
- KNN tn, fp: 138, 0
- KNN fn, tp: 9, 0
- KNN f1 score: 0.000
- KNN cohens kappa score: 0.000
- ------ Step 5/5: Slice 2/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- Epoch 1/3
- Epoch 2/3
- Epoch 3/3
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 136, 2
- LR fn, tp: 3, 6
- LR f1 score: 0.706
- LR cohens kappa score: 0.688
- LR average precision score: 0.686
- -> test with 'GB'
- GB tn, fp: 136, 2
- GB fn, tp: 7, 2
- GB f1 score: 0.308
- GB cohens kappa score: 0.281
- -> test with 'KNN'
- KNN tn, fp: 138, 0
- KNN fn, tp: 9, 0
- KNN f1 score: 0.000
- KNN cohens kappa score: 0.000
- ------ Step 5/5: Slice 3/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- Epoch 1/3
- Epoch 2/3
- Epoch 3/3
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 135, 3
- LR fn, tp: 5, 4
- LR f1 score: 0.500
- LR cohens kappa score: 0.472
- LR average precision score: 0.535
- -> test with 'GB'
- GB tn, fp: 136, 2
- GB fn, tp: 6, 3
- GB f1 score: 0.429
- GB cohens kappa score: 0.402
- -> test with 'KNN'
- KNN tn, fp: 138, 0
- KNN fn, tp: 9, 0
- KNN f1 score: 0.000
- KNN cohens kappa score: 0.000
- ------ Step 5/5: Slice 4/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- Epoch 1/3
- Epoch 2/3
- Epoch 3/3
- -> create 518 synthetic samples
- -> test with 'LR'
- LR tn, fp: 137, 1
- LR fn, tp: 4, 5
- LR f1 score: 0.667
- LR cohens kappa score: 0.649
- LR average precision score: 0.842
- -> test with 'GB'
- GB tn, fp: 137, 1
- GB fn, tp: 7, 2
- GB f1 score: 0.333
- GB cohens kappa score: 0.312
- -> test with 'KNN'
- KNN tn, fp: 138, 0
- KNN fn, tp: 9, 0
- KNN f1 score: 0.000
- KNN cohens kappa score: 0.000
- ------ Step 5/5: Slice 5/5 -------
- -> Reset the GAN
- -> Train generator for synthetic samples
- Epoch 1/3
- Epoch 2/3
- Epoch 3/3
- -> create 516 synthetic samples
- -> test with 'LR'
- LR tn, fp: 137, 0
- LR fn, tp: 3, 3
- LR f1 score: 0.667
- LR cohens kappa score: 0.657
- LR average precision score: 0.760
- -> test with 'GB'
- GB tn, fp: 136, 1
- GB fn, tp: 3, 3
- GB f1 score: 0.600
- GB cohens kappa score: 0.586
- -> test with 'KNN'
- KNN tn, fp: 137, 0
- KNN fn, tp: 6, 0
- KNN f1 score: 0.000
- KNN cohens kappa score: 0.000
- ### Exercise is done.
- -----[ LR ]-----
- maximum:
- LR tn, fp: 138, 5
- LR fn, tp: 6, 7
- LR f1 score: 0.824
- LR cohens kappa score: 0.813
- LR average precision score: 0.917
- average:
- LR tn, fp: 135.92, 1.88
- LR fn, tp: 4.36, 4.04
- LR f1 score: 0.562
- LR cohens kappa score: 0.540
- LR average precision score: 0.675
- minimum:
- LR tn, fp: 133, 0
- LR fn, tp: 2, 2
- LR f1 score: 0.364
- LR cohens kappa score: 0.338
- LR average precision score: 0.498
- -----[ GB ]-----
- maximum:
- GB tn, fp: 137, 5
- GB fn, tp: 8, 5
- GB f1 score: 0.600
- GB cohens kappa score: 0.586
- average:
- GB tn, fp: 135.64, 2.16
- GB fn, tp: 5.72, 2.68
- GB f1 score: 0.395
- GB cohens kappa score: 0.370
- minimum:
- GB tn, fp: 133, 0
- GB fn, tp: 3, 0
- GB f1 score: 0.000
- GB cohens kappa score: 0.000
- -----[ KNN ]-----
- maximum:
- KNN tn, fp: 138, 0
- KNN fn, tp: 9, 0
- KNN f1 score: 0.000
- KNN cohens kappa score: 0.000
- average:
- KNN tn, fp: 137.8, 0.0
- KNN fn, tp: 8.4, 0.0
- KNN f1 score: 0.000
- KNN cohens kappa score: 0.000
- minimum:
- KNN tn, fp: 137, 0
- KNN fn, tp: 6, 0
- KNN f1 score: 0.000
- KNN cohens kappa score: 0.000
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